miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST045516
species:
Panicum virgatum
source:
microPC, original name:
miR156
Taxonomy by NCBI:
Panicum virgatum
Panicum
Paniceae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CAGAAGAGAGTGAGCAC
miRNA*
GCTCACTCTCTATCTG
mismatches:
0
bulges:
1
View larger
pre-miRNA
CAGAAGAGAGTGAGCAC
ACATGGTGGTTTCTTAGCATGAGTGCCATGCTGGGAGCTGTGCGT
GCTCACTCTCTATCTG
dot-bracket secondary structure
(((((((((((((((((
.((((((....((((((((((.....)))))))))))))))).))
))))))))))).))))
SIMILARITIES
miRBase
ssp-MIR156
:
8e-35
PMRD
sbi-miR156b
:
3e-34
microPC
miR156
:
5e-39
UniProt
no hits
RFAM
mir-156: 6e-33
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record