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ABOUT THIS RECORD

ID: MNEST045566
species: Populus tremula x Populus tremuloides
miRNA family: MIR397
source: microPC, original name: miR397

Taxonomy by NCBI:
Populus tremula x Populus tremuloides Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCATTGAGTGCAGCGTTGATG

miRNA*
 CCAGCGCTGCATTCAATCA

mismatches: 3
bulges: 0
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pre-miRNA
 TCATTGAGTGCAGCGTTGATGAAATCCTACATTTTGTGCTCTTAAACTGTTACCAACCCTTTATCCATGGCATCATTTCACCAGCGCTGCATTCAATCA

dot-bracket secondary structure
..((((((((((((((((.((((((...(((.((((......)))).)))..(((............)))....)))))).))))))))))))))))..


SIMILARITIES
miRBase ptc-MIR397a: 1e-37

PMRD ptc-miR397a: 1e-37

microPC miR397: 1e-49		UniProt no hits

RFAM MIR397: 5e-34

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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