miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST045685
species:
Glycine max
source:
microPC, original name:
miR171
Taxonomy by NCBI:
Glycine max
Glycine
Phaseoleae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGATTGAGCCGTGCCAATAT
miRNA*
ATTGGCCTGGTTCACTCAGA
mismatches:
2
bulges:
0
View larger
pre-miRNA
AT
ATTGGCCTGGTTCACTCAGA
CATGTATACCACGGCACGGTTGTGTCCTTGCTAGAAAGATTTAAAACAAAATACATGTTGTGATTGTGGTTTTGGGTT
TGATTGAGCCGTGCCAATAT
dot-bracket secondary structure
((
((((((.(((((((.(((((
(......(((((((((((..(((((..(((.((((....))))...))).)))))...)))).))))))).....)))
))).))))))).))))))))
SIMILARITIES
miRBase
mtr-MIR171g
:
0.000000000002
PMRD
mtr-miR171g
:
0.000000000002
microPC
miR171
:
8e-64
UniProt
no hits
RFAM
MIR171_1: 0.00000000003
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
degradome data
download this record