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ABOUT THIS RECORD
ID:
MNEST045712
species:
Saccharum officinarum
miRNA family:
MIR444
source:
microPC, original name:
miR444
Taxonomy by NCBI:
Saccharum officinarum
Saccharum officinarum complex
Saccharum
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCAGTTGTTGCCTCAAGCTT
miRNA*
GCATGAGGCAGGAACTGCATT
mismatches:
2
bulges:
0
View larger
pre-miRNA
AA
GCATGAGGCAGGAACTGCATT
ACTTGCAAGAAAGTCACAAAATCAATTGCAGGACATACTTGTGGTTTTCTTGCAAGTTG
TGCAGTTGTTGCCTCAAG
CTT
dot-bracket secondary structure
((
((.((((((((.((((((((.
((((((((((((..(((((...................)))))..)))))))))))).)
))))))).)))))))).)
)))
SIMILARITIES
miRBase
ssp-MIR444a
:
9e-54
PMRD
osa-miR444f
:
0.0000000000003
microPC
miR444
:
9e-54
UniProt
no hits
RFAM
MIR444: 3e-32
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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