ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR395
source: microPC, original name: miR395
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAAGTGTTTGGGGGAACTC miRNA* GTTCCTCTGAACGCTTCATG mismatches: 2 bulges: 0 |
pre-miRNA
GAGTTCCTCTGAACGCTTCATGTGATTGGCTAGTTATAGGCCTTTGATGAAGTGTTTGGGGGAACTC
dot-bracket secondary structure
(((((((((..((((((((((.(((..((((.......)))).)))))))))))))..)))))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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deep sequencing data evidence
GAGTTCCTCTGAACGCTTCATGTGATTGGCTAGTTATAGGCCTTTGATGAAGTGTTTGGGGGAACTC
dot-bracket secondary structure
(((((((((..((((((((((.(((..((((.......)))).)))))))))))))..)))))))))
SIMILARITIES| miRBase mtr-MIR395o: 0.000003 PMRD gma-miR395: 2e-32 microPC miR395: 2e-32 | UniProt no hits RFAM mir-395: 0.00005 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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deep sequencing data evidence
