miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST045745
species: Glycine max
miRNA family: MIR395
source: microPC, original name: miR395

Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAAGTGTTTGGGGGAACTC

miRNA*
GTTCCTCTGAACGCTTCATG

mismatches: 2
bulges: 0

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pre-miRNA
GAGTTCCTCTGAACGCTTCATGTGATTGGCTAGTTATAGGCCTTTGATGAAGTGTTTGGGGGAACTC

dot-bracket secondary structure
(((((((((..((((((((((.(((..((((.......)))).)))))))))))))..)))))))))


SIMILARITIES
miRBase mtr-MIR395o: 0.000003

PMRD gma-miR395: 2e-32

microPC miR395: 2e-32
UniProt no hits

RFAM mir-395: 0.00005

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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deep sequencing data evidence





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