ABOUT THIS RECORDspecies: Antirrhinum majus
source: microPC, original name: miR156
Taxonomy by NCBI:
Antirrhinum majus Antirrhinum Antirrhineae Plantaginaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GACAGAAGAGAGTGAGCA miRNA* CTCACTTCTTTTCTGTC mismatches: 0 bulges: 1 |
pre-miRNA
CGACAGAAGAGAGTGAGCATCCGCAGGCAATTGTATAGTTAGATTATGCATTTGTTGGTTTATTATAAATTAATTTGCGTGTGCTCACTTCTTTTCTGTC
dot-bracket secondary structure
)((((((((((((((((((..((((.((((.((((((((...)))))))).))))(((((((...)))))))...))))..))))))).)))))))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
CGACAGAAGAGAGTGAGCATCCGCAGGCAATTGTATAGTTAGATTATGCATTTGTTGGTTTATTATAAATTAATTTGCGTGTGCTCACTTCTTTTCTGTC
dot-bracket secondary structure
)((((((((((((((((((..((((.((((.((((((((...)))))))).))))(((((((...)))))))...))))..))))))).)))))))))))
SIMILARITIES| miRBase tcc-MIR156c: 2.0E-8 PMRD cpt-miR156a: 5.0E-6 microPC miR156: 8.0E-8 | UniProt no hits RFAM 6mir-156: 3.0E-7 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
