miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Antirrhinum majus, Coffea canephora, Fraxinus excelsior, Ipomoea batatas, Mimulus guttatus, Mimulus guttatus var. nasutus, Mimulus lewisii, Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Ocimum basilicum, Petunia axillaris subsp. axillaris, Salvia miltiorrhiza, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Striga hermonthica, Triphysaria pusilla, Triphysaria versicolor, Capsicum annuum, Catharanthus roseus, Solanum tuberosum, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST046151
species: Antirrhinum majus
source: microPC, original name: miR156

Taxonomy by NCBI:
Antirrhinum majus Antirrhinum Antirrhineae Plantaginaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GACAGAAGAGAGTGAGCA

miRNA*
 CTCACTTCTTTTCTGTC

mismatches: 0
bulges: 1
View larger
pre-miRNA
 GACAGAAGAGAGTGAGCATCCGCAGGCAATTGTATAGTTAGATTATGCATTTGTTGGTTTATTATAAATTAATTTGCGTGTGCTCACTTCTTTTCTGTC

dot-bracket secondary structure
((((((((((((((((((..((((.((((.((((((((...)))))))).))))(((((((...)))))))...))))..))))))).)))))))))))


SIMILARITIES
miRBase tcc-MIR156c: 0.00000002

PMRD cpt-miR156a: 0.000005

microPC miR156: 0.00000008		UniProt no hits

RFAM mir-156: 0.0000003

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record




Liczniki na strone;