ABOUT THIS RECORDspecies: Antirrhinum majus
source: microPC, original name: miR156
Taxonomy by NCBI:
Antirrhinum majus Antirrhinum Antirrhineae Plantaginaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GACAGAAGAGAGTGAGCA miRNA* CTCACTTCTTTTCTGTC mismatches: 0 bulges: 1 |
pre-miRNA
GACAGAAGAGAGTGAGCATCCGCAGGCAATTGTATAGTTAGATTATGCATTTGTTGGTTTATTATAAATTAATTTGCGTGTGCTCACTTCTTTTCTGTC
dot-bracket secondary structure
((((((((((((((((((..((((.((((.((((((((...)))))))).))))(((((((...)))))))...))))..))))))).)))))))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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GACAGAAGAGAGTGAGCATCCGCAGGCAATTGTATAGTTAGATTATGCATTTGTTGGTTTATTATAAATTAATTTGCGTGTGCTCACTTCTTTTCTGTC
dot-bracket secondary structure
((((((((((((((((((..((((.((((.((((((((...)))))))).))))(((((((...)))))))...))))..))))))).)))))))))))
SIMILARITIES| miRBase tcc-MIR156c: 0.00000002 PMRD cpt-miR156a: 0.000005 microPC miR156: 0.00000008 | UniProt no hits RFAM mir-156: 0.0000003 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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