miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST046311
species: Solanum lycopersicum
source: microPC, original name: miR167

Taxonomy by NCBI:
Solanum lycopersicum Lycopersicon Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGAAGCTGCCAGCATGATCT

miRNA*
 ATCATGTGGTTGCTTCA

mismatches: 2
bulges: 1
View larger
pre-miRNA
 TGAAGCTGCCAGCATGATCTAAACTTACCTATAAATTTATATTAAGGCAAGATCAGATCATGTGGTTGCTTCA

dot-bracket secondary structure
.(((((.((((.((((((((...(((.(((.(((.......)))))).)))...)))))))))))).))))).


SIMILARITIES
miRBase vvi-MIR167e: 0.00000005

PMRD vvi-miR167e: 0.00000005

microPC miR167: 5e-36		UniProt no hits

RFAM MIR167_1: 0.0000009

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
degradome data
download this record




Liczniki na strone;