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ABOUT THIS RECORD
ID:
MNEST046394
species:
Brassica napus
miRNA family:
MIR162
source:
microPC, original name:
miR162
Taxonomy by NCBI:
Brassica napus
Brassica
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCGATAAACCTCTGCATCCA
miRNA*
GAGGCAGCGGTTCATCGATC
mismatches:
4
bulges:
0
View larger
pre-miRNA
TG
GAGGCAGCGGTTCATCGATC
AATTCCTGTGAAAAATGATGTTGGAAACAATTTACATGGCAAGCATGAATCGA
TCGATAAACCTCTGCATCCA
dot-bracket secondary structure
.(
((.((((.((((.(((((((
.((((.(((.....(((..((((....))))...))).....))).)))).))
))))).)))).)))).))).
SIMILARITIES
miRBase
ath-MIR162b
:
0.000000000001
PMRD
ath-miRf10254-akr
:
0.000000000001
microPC
miR162
:
5e-49
UniProt
no hits
RFAM
MIR162_2: 0.00000000002
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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