miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST046494
species: Cichorium intybus
source: microPC, original name: miR167

Taxonomy by NCBI:
Cichorium intybus Cichorium Cichoriinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGAAGCTGCCAGCATGATCTGG

miRNA*
 AGGTCATCCTTGCAGCTTCA

mismatches: 3
bulges: 0
View larger
pre-miRNA
 TGAAGCTGCCAGCATGATCTGGTGATGCCAAACTGGGTGGCCTGTGTATGTTTGTCCATATATGAGTGGATAATGTAAAAGTTCTATATATAGTCAAATG
TCTTTGTGTGTGTTTTTGGTGATGTGTTGGTATCTGTTCATGGGTAGAGTAAGGAGAGGTTAACCAGGTCATCCTTGCAGCTTCA

dot-bracket secondary structure
.((((((((.((.((((((((((...(((...((.....(((((((.....((((((((......))))))))......((.((.((((((..(((((..
.(.......)....)))))..)))))).))...))...)))))))......))....)))..)))))))))).)).)))))))).


SIMILARITIES
miRBase vvi-MIR167a: 0.0000006

PMRD vvi-miR167a: 0.0000006

microPC miR167: 2e-102		UniProt no hits

RFAM MIR167_1: 0.00001

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record




Liczniki na strone;