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ABOUT THIS RECORD

ID: MNEST046657
species: Saccharum officinarum
source: microPC, original name: miR156

Taxonomy by NCBI:
Saccharum officinarum Saccharum officinarum complex Saccharum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CAGAAGAGAGTGAGCAC

miRNA*
 GCTCACTTCTCTCTCTG

mismatches: 0
bulges: 2
View larger
pre-miRNA
 CAGAAGAGAGTGAGCACACATGGTGCCTTTCTTGCATGATGAACGATCGAGAGGTTCATGCTCGAAGCTATGCGTGCTCACTTCTCTCTCTG

dot-bracket secondary structure
(((((((((((((((((.((((((....(((..((((((......(((....)))))))))..))))))))).)))))))).))))).))))


SIMILARITIES
miRBase ssp-MIR156: 3e-47

PMRD zma-miR156o: 3e-38

microPC miR156: 3e-47		UniProt no hits

RFAM mir-156: 6e-18

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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