miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
ABOUT THIS RECORD
ID:
MNEST046696
species:
Centaurea solstitialis
source:
microPC, original name:
miR159
Taxonomy by NCBI:
Centaurea solstitialis
Centaurea
Centaureinae
Cardueae
Carduoideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGGATTGAAGGGAGCTCT
miRNA*
AGCTCCTTGAAGTCCAATA
mismatches:
2
bulges:
0
View larger
pre-miRNA
AG
AGCTCCTTGAAGTCCAATA
GAGGATCTGAGTGGGAAGATAGTGCTGCTGGCTTATGGATTCCTCAAGTCCTATCTTTATGGTTTTGTATAGGCTTTGT
GGCTTGCATAACCCAGGAGCTTTATTACCTTACTTTATGATCTTTTT
TTGGATTGAAGGGAGCTCT
dot-bracket secondary structure
((
((((((((..(((((((.(
(((((((.(((((((..(((((.(((.((((.(((((.(..((.((((.((((((...........).))))).)))).
))..).))))).)))).))).)))))..)))))))...)))))))).
)))))))..))))))))))
SIMILARITIES
miRBase
vvi-MIR159c
:
0.00000000004
PMRD
vvi-miR159c
:
0.00000000004
microPC
miR159
:
1e-78
UniProt
no hits
RFAM
MIR159: 0.0000000006
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record