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ABOUT THIS RECORD

ID: MNEST048632
species: Gossypium raimondii
miRNA family: MIR157
source: PMRD, original name: gra-miR157c

Taxonomy by NCBI:
Gossypium raimondii Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGACAGAAGAGAGAGAGCAC

miRNA*
 CATCACTCATCTCCCATCCAA

mismatches: 10
bulges: 1
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pre-miRNA
 TTGACAGAAGAGAGAGAGCACGATGAAGATCTTGCGTCGTAGCCATGTTTGAATCAACTCTGGATTCTTCTACACCTACAAAATTTGACCAAATTTGTTA
AGCTTGTATATCAGTTCCATAAGGAGAGCATCATTTTAACAACCATTAAAGGCCTTCAGAACCATCACTCATCTCCCATCCAA

dot-bracket secondary structure
..((..(.((((((.((......(((((..(((.....((((...(((..(((((.......)))))....))).))))...............((((((
((..((....((...(((....)))))....)).))))))))......)))..)))))......)).))).))).)..))...


SIMILARITIES
miRBase far-MIR529: 0.0001

PMRD tae-miR156b: 0.0000001

microPC miR157: 0.0001		UniProt no hits

RFAM no hits

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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