miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST048634
species: Gossypium raimondii
source: PMRD, original name: gra-miR160a

Taxonomy by NCBI:
Gossypium raimondii Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCCTGGCTCCCTGTATGCCT

miRNA*
 TCAAACAGCTGGAAGCCAGACGGA

mismatches: 7
bulges: 3
View larger
pre-miRNA
 TATCAAACAGCTGGAAGCCAGACGGAAACAGTCCGGACTTCAGTTTATTAAGATGGGGATCTGATGAAGATAATCTGACTTGAGCATGCCTGGCTCCCTGT
ATGCCT

dot-bracket secondary structure
)..((.((((..(((.(((((.((((.....)))).......(((((...((((....((((.....)))).))))....)))))....))))))))))))
.))...


SIMILARITIES
miRBase far-MIR160: 5.0E-6

PMRD gra-miR160b: 9.0E-14

microPC miR160: 0.0003		UniProt sp|Q653H7|ARFR_ORYSJ: 0.0001

RFAM 0mir-160: 9.0E-5

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
download this record




Liczniki na strone;