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ABOUT THIS RECORD
ID:
MNEST048637
species:
Gossypium raimondii
miRNA family:
MIR172
source:
PMRD, original name:
gra-miR172a
Taxonomy by NCBI:
Gossypium raimondii
Gossypium
Malvoideae
Malvaceae
Malvales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGAATCTTGATGATGCTGCAT
miRNA*
TGGCATTAGTGTAGT
mismatches:
13
bulges:
0
View larger
pre-miRNA
AGAATCTTGATGATGCTGCAT
GAGAGAACAG
TGGCATTAGTGTAGT
ACTGACCTGACCGTGCATTTGCCACGGCCAATCAGGGACACGTTGTGGAGGATC
GAATTCAACCGGTTTCACCATTGTTCTTTCCTCACTAGGAAAGAATCT
dot-bracket secondary structure
..........((((((..(.(
(......)))
..))))))((((...
.((((..((.((((((....).))))).)).))))..))))...((((.(((((
(........))))))..)))).((((((((((....))))))))))..
SIMILARITIES
miRBase
zma-MIR172d
:
0.0001
PMRD
gra-miR172b
:
4e-72
microPC
miR172
:
0.0001
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
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