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ABOUT THIS RECORD

ID: MNEST048670
species: Ipomoea nil
source: PMRD, original name: ini-miR157b

Taxonomy by NCBI:
Ipomoea nil Ipomoea Ipomoeeae Convolvulaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGACAGAAGATAGAGAGCAT

miRNA*
 CGCTCATTGTGACCTGCCAA

mismatches: 7
bulges: 0
View larger
pre-miRNA
 TTGACAGAAGATAGAGAGCATGCTAGAAATTACATTGATAAGCTATGTGGTTCAGAGACCAATCTTCTTATGAGTTCCAATAAGGAGTTGGTTTGTCCCC
CCACTGGTATTACGTCTTCAGGTTGACCCTTCACCACGAGGATCATATGTAATTCTCCTGCGGCGCTCATTGTGACCTGCCAA

dot-bracket secondary structure
.((.(((...((((.((((.(((..((((((((((((....((((.((((...(.(((((((.((((((((........))))))))))))))).)....
)))))))).....((((((.(((.((....)))))..)))))))).)))))))).))..)))..)))).))))...))).)).


SIMILARITIES
miRBase vvi-MIR156i: 0.0006

PMRD iba-miR157: 1e-91

microPC miR157: 0.0006		UniProt no hits

RFAM no hits

Identical with: ini-miR157a from PMRD (MNEST048669)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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