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ABOUT THIS RECORD

ID: MNEST054346
species: Populus trichocarpa
source: PMRD, original name: ptc-miRf12524-akr

Taxonomy by NCBI:
Populus trichocarpa Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CCTGTAATCCCAGCTACTCGGG

miRNA*
 CGGGAGGCGGAGGTTGCAGTG

mismatches: 1
bulges: 3
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pre-miRNA
 GCGCACACCTGTAATCCCAGCTACTCGGGAGGGGGAGGCAGGAGAATCTCTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCC

dot-bracket secondary structure
..((.(((.(((((((((.(((.((((((.((((((..(....)..))))))...)))))).))))).)))))))))).)).


SIMILARITIES
miRBase hsa-mir-566: 0.000000000000004

PMRD no hits

microPC no hits		UniProt sp|Q6UX73|CP089_HUMAN: 0.000001

RFAM Metazoa_SRP: 9e-29

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
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