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Species belonging to selected taxon:
Arachis duranensis
,
Arachis hypogaea
,
Arachis ipaensis
,
Cucumis melo subsp. melo
,
Euonymus alatus
,
Euphorbia esula
,
Fagus sylvatica
,
Fragaria vesca
,
Fragaria x ananassa
,
Glycine soja
,
Glycyrrhiza uralensis
,
Hevea brasiliensis
,
Humulus lupulus
,
Jatropha curcas
,
Juglans hindsii x Juglans regia
,
Linum usitatissimum
,
Lotus japonicus
,
Manihot esculenta
,
Medicago sativa
,
Phaseolus acutifolius
,
Phaseolus coccineus
,
Pisum sativum
,
Populus deltoides
,
Populus euphratica
,
Populus nigra
,
Populus tremula
,
Populus tremula x Populus alba
,
Populus tremula x Populus tremuloides
,
Populus tremuloides
,
Populus trichocarpa x Populus nigra
,
Populus x canadensis
,
Prunus armeniaca
,
Prunus persica
,
Quercus petraea
,
Quercus robur
,
Trifolium pratense
,
Bruguiera gymnorhiza
,
Cajanus cajan
,
Cicer arietinum
,
Glycine max
,
Vigna unguiculata
,
Medicago truncatula
,
Populus trichocarpa
,
Phaseolus vulgaris
,
Ricinus communis
,
Populus trichocarpa x Populus deltoides
ABOUT THIS RECORD
ID:
MNEST054346
species:
Populus trichocarpa
source:
PMRD, original name:
ptc-miRf12524-akr
Taxonomy by NCBI:
Populus trichocarpa
Populus
Saliceae
Salicaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CCTGTAATCCCAGCTACTCGGG
miRNA*
CGGGAGGCGGAGGTTGCAGTG
mismatches:
1
bulges:
3
View larger
pre-miRNA
GCGCACA
CCTGTAATCCCAGCTACTCGGG
AGGGGGAGGCAGGAGAATCTCTTGAACC
CGGGAGGCGGAGGTTGCAGTG
AGCC
dot-bracket secondary structure
..((.((
(.(((((((((.(((.((((((
.((((((..(....)..))))))...))
)))).))))).))))))))))
.)).
SIMILARITIES
miRBase
hsa-mir-566
:
0.000000000000004
PMRD
no hits
microPC
no hits
UniProt
sp|Q6UX73|CP089_HUMAN: 0.000001
RFAM
Metazoa_SRP: 9e-29
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
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