miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

ABOUT THIS RECORD

ID: MNEST054621
species: Saccharum officinarum
source: PMRD, original name: sof-miR156c

Taxonomy by NCBI:
Saccharum officinarum Saccharum officinarum complex Saccharum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TGACAGAAGAGAGAGAGCAC

miRNA*
CATCCTTTCGCCAGGTCGA

mismatches: 9
bulges: 2

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pre-miRNA
TGACAGAAGAGAGAGAGCACAGCTAGAGTCCGAGGGGACTCCTGCAAGACATCCTTTCGCCAGGTCGA

dot-bracket secondary structure
.(((....(((((.((.....((..((((((....))))))..))......))))))).....)))..

UniProt no hits

RFAM mir-156: 0.0008

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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