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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Cynodon dactylon, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST054621
species: Saccharum officinarum
source: PMRD, original name: sof-miR156c

Taxonomy by NCBI:
Saccharum officinarum Saccharum officinarum complex Saccharum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAGAAGAGAGAGAGCAC

miRNA*
 CATCCTTTCGCCAGGTCGA

mismatches: 9
bulges: 2
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pre-miRNA
 TGACAGAAGAGAGAGAGCACAGCTAGAGTCCGAGGGGACTCCTGCAAGACATCCTTTCGCCAGGTCGA

dot-bracket secondary structure
.(((....(((((.((.....((..((((((....))))))..))......))))))).....)))..


SIMILARITIES
miRBase far-MIR529: 0.00000005

PMRD hvv-miR156d: 0.0000000002

microPC miR157: 0.00005		UniProt no hits

RFAM mir-156: 0.0008

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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