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ABOUT THIS RECORD
ID:
MNEST054659
species:
Solanum tuberosum
source:
PMRD, original name:
stu-miR156d
Taxonomy by NCBI:
Solanum tuberosum
Solanum
Solaneae
Solanoideae
Solanaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGACAGAAGAGAGAGAGCAC
miRNA*
GCCTTGCATGAACTGGAA
mismatches:
10
bulges:
2
View larger
pre-miRNA
TGACAGAAGAGAGAGAGCAC
GATCAGAATCAACAATATCATTTAATCCACTGGAGAAGATCTTTTGTCCGCTGCTAGAAATTCCTGCTGCAGAAGTGGGA
TGTTCAAAAAGTGGCTGGCAGATTGAAGAAGATTCAGTCAGACTATGATCACT
GCCTTGCATGAACTGGAA
dot-bracket secondary structure
...(((......(((.(((.
(((((...((.........((((..(((...)))..))))....((((.((..((.(((..(((..((.....))..)))
..)))....))..)).))))(((((((.....))))))).))...)))))..)
))))).......)))...
SIMILARITIES
miRBase
zma-MIR156j
:
0.0005
PMRD
gra-miR157c
:
0.000009
microPC
miR157
:
0.0005
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
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