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Species belonging to selected taxon:
Ixodes scapularis
,
Tetranychus urticae
,
Rhipicephalus microplus
,
Rhipicephalus appendiculatus
ABOUT THIS RECORD
ID:
MNEST008971
species:
Tetranychus urticae
miRNA family:
miR-2799
source:
miRNEST
Taxonomy by NCBI:
Tetranychus urticae
Tetranychus
Tetranychidae
Tetranychoidea
Raphignathae
Eleutherengona
Anystina
Prostigmata
Trombidiformes
Acariformes
Acari
Arachnida
Chelicerata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGAGGTTTATTAACATGATTA
miRNA*
ATCATTTAAAAAACCTAATC
mismatches:
4
bulges:
1
View larger
pre-miRNA
ATCTTCATTTGA
ATCATTTAAAAAACCTAATC
CAACTCCAATAGCTGAATAGAGTAAGGCAACTACACCAAACGTGTTTCCAGTGACAGCACCAGTTTTT
CCAATGTAATTTAATATTTGTGATCTACGAACTGCCCATGAA
AGAGGTTTATTAACATGATTA
GAATCGATT
dot-bracket secondary structure
...((.((((.(
(((((((((.((((((..((
..((((.............))))..((((...((((.....))))(((....((...(((.(((.((.
..(((...))).)).))).))).))...))).))))...)).
..)))))).)))).)))))).
)))).))..
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record