miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Ixodes scapularis, Tetranychus urticae, Rhipicephalus microplus, Rhipicephalus appendiculatus



ABOUT THIS RECORD

ID: MNEST008971
species: Tetranychus urticae
miRNA family: miR-2799
source: miRNEST

Taxonomy by NCBI:
Tetranychus urticae Tetranychus Tetranychidae Tetranychoidea Raphignathae Eleutherengona Anystina Prostigmata Trombidiformes Acariformes Acari Arachnida Chelicerata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGAGGTTTATTAACATGATTA

miRNA*
ATCATTTAAAAAACCTAATC

mismatches: 4
bulges: 1

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pre-miRNA
ATCTTCATTTGAATCATTTAAAAAACCTAATCCAACTCCAATAGCTGAATAGAGTAAGGCAACTACACCAAACGTGTTTCCAGTGACAGCACCAGTTTTT
CCAATGTAATTTAATATTTGTGATCTACGAACTGCCCATGAAAGAGGTTTATTAACATGATTAGAATCGATT


dot-bracket secondary structure
...((.((((.((((((((((.((((((..((..((((.............))))..((((...((((.....))))(((....((...(((.(((.((.
..(((...))).)).))).))).))...))).))))...))...)))))).)))).)))))).)))).))..



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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