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Species belonging to selected taxon:
Schistosoma mansoni
,
Schistosoma japonicum
,
Taenia solium
,
Schmidtea mediterranea
ABOUT THIS RECORD
ID:
MNEST044066
species:
Schistosoma japonicum
source:
Huang et al., original name:
sja-miR-3096
Taxonomy by NCBI:
Schistosoma japonicum
Schistosoma
Schistosomatidae
Schistosomatoidea
Strigeidida
Digenea
Trematoda
Platyhelminthes
Acoelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGGACCACTGAGCCGGCTCCTT
miRNA*
GGAATCGGACCCAGGATTCTCT
mismatches:
6
bulges:
2
View larger
pre-miRNA
CCACGACCCCGTTG
GGAATCGGACCCAGGATTCTCT
GGCTCCGCGACGAGCGCCTCGCTAT
TGGACCACTGAGCCGGCTCCTT
ACGGTTGATA
dot-bracket secondary structure
...(((((..((.(
(((..(((.(.((((.(((..(
(((...(((.....)))...)))).
.))).).))).))))..)))).
)))))))...
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record