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Species belonging to selected taxon:

Schistosoma mansoni, Schistosoma japonicum, Taenia solium, Schmidtea mediterranea



ABOUT THIS RECORD

ID: MNEST007489
species: Schistosoma mansoni
miRNA family: miR-1957
source: miRNEST

Taxonomy by NCBI:
Schistosoma mansoni Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CAGTGGTAGAGCATTCGACTG

miRNA*
GTTGAAGGTGTTGTGGTATGGTG

mismatches: 4
bulges: 2

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pre-miRNA
TGTAGTGTTTGTAGTTGAAGGTGTTGTGGTATGGTGTGGTGTTGGAGATGTGAACTTGTGACAGTGGCGAAATCGGGGGTATAGCTCAGTGGTAGAGCAT
TCGACTG
CAGATCGAGA


dot-bracket secondary structure
......((((((((((((..(((((.((.(((...((.(((.....(((.((.(((......)))..))..))).....))).))...))).)).)))))
)))))))
))))).....



SIMILARITIES
miRBase no hits

PMRD ath-miRf11039-akr: 0.0004

microPC no hits
UniProt no hits

RFAM tRNA: 1e-16
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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