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Species belonging to selected taxon:
Schistosoma mansoni
,
Schistosoma japonicum
,
Taenia solium
,
Schmidtea mediterranea
ABOUT THIS RECORD
ID:
MNEST009905
species:
Schmidtea mediterranea
miRNA family:
miR-4154
source:
miRNEST
Taxonomy by NCBI:
Schmidtea mediterranea
Schmidtea
Dugesiidae
Paludicola
Tricladida
Seriata
Turbellaria
Platyhelminthes
Acoelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTGTTGGTTTTCGTTTCTTA
miRNA*
AGACAACGGGGGCTCTTAAAACC
mismatches:
3
bulges:
2
View larger
pre-miRNA
TATTAAAATATG
AGACAACGGGGGCTCTTAAAACC
TGTTCTTTATATTCTTTGTGATTTTCGTAGCTTTTTTTGACTTTGGGTTCTTTGGGTTTATTGAT
TTTCGTAGCTTTTTTTGACTTTGGG
TTTGTTGGTTTTCGTTTCTTA
AATTTAAAA
dot-bracket secondary structure
..((.((((.((
(((.((((((((((....(((((
((.((........((.((.((...(((.(((((.....((((...))))....)))))...))).
)).)).))........))...))))
)))...)))))))))))))))
.)))).)).
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record