miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Nematostella vectensis, Anemonia viridis, Metridium senile, Aiptasia pallida



ABOUT THIS RECORD

ID: MNEST008529
species: Nematostella vectensis
miRNA family: miR-2444
source: miRNEST

Taxonomy by NCBI:
Nematostella vectensis Nematostella Edwardsiidae Actiniaria Hexacorallia Anthozoa Cnidaria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GTTGTTTTGTTTTTTGTTTTG

miRNA*
TGCCATGTAAATGGAACAACAC

mismatches: 5
bulges: 1

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pre-miRNA
ATTTCATCAGCATGCCATGTAAATGGAACAACACTCAAAGCAACCTTCAGCATGTCTGGCATAAGAGGGACAGTTACATTCACTCAGTGATTCAAATCTT
TTTATATCAGGTCTTTCCTCCCTACTAAGAATATGTTATTTGTTTTTTTGTTGTTTTGTTTTTTGTTTTGCTTCCTGAG


dot-bracket secondary structure
...(((..((((...((...(((((((((((((...(((((((.....(((((((((((.(((((((((..((((((.........))))))....))))
))))).)))).((((...........)))))))))))..)))))))..)))))))))))))..))...))))...))).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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