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Species belonging to selected taxon:
Aedes aegypti
ABOUT THIS RECORD
ID:
MNEST035237
species:
Aedes aegypti
miRNA family:
mir-980
source:
miRBase, original name:
aae-mir-980
(
MI0013449
)
Taxonomy by NCBI:
Aedes aegypti
Stegomyia
Aedes
Aedes/Ochlerotatus group
Culicini
Culicinae
Culicidae
Culicoidea
Culicimorpha
Nematocera
Diptera
Endopterygota
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAGCTGCCTAGTGAAGGGC
miRNA*
CGTTCATTGGGTCATCTAGC
mismatches:
2
bulges:
1
View larger
pre-miRNA
ACTACAATTCGGC
CGTTCATTGGGTCATCTAGC
TCGTGTTGGAAACAGT
TAGCTGCCTAGTGAAGGGC
AATATTGT
dot-bracket secondary structure
...(((((...((
(.(((((((((.((.(((((
(.((.......)))))
))).))))))))))).)))
...)))))
SIMILARITIES
miRBase
cqu-mir-980
:
2e-23
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
Solexa
references
[
1
] Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR,
BMC Genomics. 11:119(2010).
,
"Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus"