miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Alvinella pompejana



ABOUT THIS RECORD

ID: MNEST007469
species: Alvinella pompejana
miRNA family: mir-981
source: miRNEST

Taxonomy by NCBI:
Alvinella pompejana Alvinella Alvinellidae Terebellida Scolecida Polychaeta Annelida Annelida/Echiura/Pogonophora group Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTCGTTGTCGTCGAAACCTGC

miRNA*
GGGTTTCATGACAACGGGACA

mismatches: 1
bulges: 2

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pre-miRNA
GCCCAGCTGGTCTGGGTTTCATGACAACGGGACATGGATTTGAATTTGTTCGTTGTCGTCGAAACCTGCCTCAGCGGCT

dot-bracket secondary structure
(((..(((((..((((((((((((((((((.(((............))))))))))))).))))))))..)))))))).


SIMILARITIES
miRBase cte-mir-981: 0.0000009

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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