miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Alvinella pompejana



ABOUT THIS RECORD

ID: MNEST007462
species: Alvinella pompejana
miRNA family: mir-466
source: miRNEST

Taxonomy by NCBI:
Alvinella pompejana Alvinella Alvinellidae Terebellida Scolecida Polychaeta Annelida Annelida/Echiura/Pogonophora group Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGTGTGTGCGTATATGTATAT

miRNA*
TACGTTTATCTACATACACC

mismatches: 2
bulges: 1

View larger
pre-miRNA
CCATGACATTACGTTTATCTACATACACCCACTGACAACCCATACGCTTTTAAATCTATAAACACGTATTTATACAGATTTGAATTTTGATCAAATGAAA
GGCCTCAGCTTAGAAAGCTTAACCACCCGGATGCATGTGTGTGCGTATATGTATATGTATAATAAA


dot-bracket secondary structure
.....(((((((((.(((.((((((((..(((((.((...........((((((((((((((......)))))..)))))))))...........))...
((....(((((...)))))...))...))).))..)))))))).))).))))).))))........



SIMILARITIES
miRBase mmu-mir-466b-1: 0.0005

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





Liczniki na strone;