miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Amborella trichopoda



ABOUT THIS RECORD

ID: MNEST000035
species: Amborella trichopoda
miRNA family: MIR528
source: miRNEST

Taxonomy by NCBI:
Amborella trichopoda Amborella Amborellaceae Amborellales basal Magnoliophyta Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGGAAGGGGCATGCAGTGGGA

miRNA*
TCGCTGTTGGCCCTTTTTAAG

mismatches: 3
bulges: 0

View larger
pre-miRNA
CTGGGTTCGGTAGGAAGGGGCATGCAGTGGGAGATATTCCTGGGGTGCGTTTTAAGGTGGTCAAAGTCTCTGGGGTCTCGCTGTTGGCCCTTTTTAAGGA
GAAGAA


dot-bracket secondary structure
(((....)))..(((((((((..(((((((((.....((((((((.((.................)))))))))))))))))))..))))))))).....
......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|P46297|RS23_FRAAN: 0.000000000003

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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