miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Sus scrofa, Bos taurus, Rattus norvegicus, Gallus gallus, Canis lupus familiaris, Ovis aries, Macaca fascicularis, Anolis carolinensis, Trichosurus vulpecula, Papio anubis, Homo sapiens, Taeniopygia guttata, Peromyscus maniculatus bairdii, Pongo abelii, Ursus americanus, Equus caballus, Oryctolagus cuniculus, Macaca nemestrina, Cavia porcellus, Bos indicus, Meleagris gallopavo, Lonchura striata domestica, Bos sp., Macropus eugenii, Peromyscus polionotus subgriseus, Capra hircus, Pan troglodytes verus, Macaca mulatta



ABOUT THIS RECORD

ID: MNEST033345
species: Bos taurus
miRNA family: mir-374
source: miRBase, original name: bta-mir-374a (MI0005466)

Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTATAATACAACCTGATAAGTG

miRNA*
 CTTATCAGGTTGTATTGTAATT

mismatches: 0
bulges: 0
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pre-miRNA
 TACATCGGCCATTATAATACAACCTGATAAGTGTTACAGCACTTATCAGGTTGTATTGTAATTGTCTGTGTA

dot-bracket secondary structure
(((((.(((.((((((((((((((((((((((((....)))))))))))))))))))))))).))).)))))


SIMILARITIES
miRBase eca-mir-374a: 2e-35

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-374: 8e-29

Identical with: eca-mir-374a from miRBase (MNEST027154)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned

references
[1] Gu Z, Eleswarapu S, Jiang H, FEBS Lett. 581:981-988(2007)., "Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland"



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