ABOUT THIS RECORDspecies: Gallus gallus
source: miRBase, original name: gga-mir-1845 (MI0008206)
Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCGGCTGCGCCCGGAGGA miRNA* CTCCCGGCGTACATCCCGCCGGCA mismatches: 1 bulges: 6 |
pre-miRNA
GCTTCTTTCTCTTCCTCCCGGCGTACATCCCGCCGGCAGCACCGAGCATCGCCGGCTGCGCCCGGAGGAGGAGTTTAAACAGGAGT
dot-bracket secondary structure
((((((..((((((((((.((((((......((((((.((.....))...)))))))))))).)))))))))).......))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Northern
references
[1] Shao P, Zhou H, Xiao ZD, He JH, Huang MB, Chen YQ, Qu LH, Gene. 418:34-40(2008)., "Identification of novel chicken microRNAs and analysis of their genomic organization"
GCTTCTTTCTCTTCCTCCCGGCGTACATCCCGCCGGCAGCACCGAGCATCGCCGGCTGCGCCCGGAGGAGGAGTTTAAACAGGAGT
dot-bracket secondary structure
((((((..((((((((((.((((((......((((((.((.....))...)))))))))))).)))))))))).......))))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Northern
references
[1] Shao P, Zhou H, Xiao ZD, He JH, Huang MB, Chen YQ, Qu LH, Gene. 418:34-40(2008)., "Identification of novel chicken microRNAs and analysis of their genomic organization"
