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Species belonging to selected taxon:
Mus musculus
,
Sus scrofa
,
Bos taurus
,
Rattus norvegicus
,
Gallus gallus
,
Canis lupus familiaris
,
Ovis aries
,
Macaca fascicularis
,
Anolis carolinensis
,
Trichosurus vulpecula
,
Papio anubis
,
Homo sapiens
,
Taeniopygia guttata
,
Peromyscus maniculatus bairdii
,
Pongo abelii
,
Ursus americanus
,
Equus caballus
,
Oryctolagus cuniculus
,
Macaca nemestrina
,
Cavia porcellus
,
Bos indicus
,
Meleagris gallopavo
,
Lonchura striata domestica
,
Bos sp.
,
Macropus eugenii
,
Peromyscus polionotus subgriseus
,
Capra hircus
,
Pan troglodytes verus
,
Macaca mulatta
ABOUT THIS RECORD
ID:
MNEST026348
species:
Gallus gallus
source:
miRBase, original name:
gga-mir-2127
(
MI0010732
)
Taxonomy by NCBI:
Gallus gallus
Gallus
Phasianinae
Phasianidae
Galliformes
Neognathae
Aves
Coelurosauria
Theropoda
Saurischia
Dinosauria
Archosauria
Sauria
Sauropsida
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CGGGAGGGGAGGGAGGGCGGG
miRNA*
CCCGCTTCCTCCCTTTGTCTGCGGC
mismatches:
0
bulges:
6
View larger
pre-miRNA
CCTCCTTGTCCCGGCTCGTC
CCCGCTTCCTCCCTTTGTCTGCGGC
CGCCGAACAGGCCGTGTGGCGGC
CGGGAGGGGAGGGAGGGCGGG
CGAGAGGCAGG
GAGG
dot-bracket secondary structure
((((((((((....((((((
(((.((((((((((...(((.((((
(((((.((.....)).)))))))
))))))))))))))))).)))
)))).))))))
))))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
Northern, Solexa
references
[
1
] Rathjen T, Pais H, Sweetman D, Moulton V, Munsterberg A, Dalmay T,
FEBS Lett. 583:1422-1426(2009).
,
"High throughput sequencing of microRNAs in chicken somites"