ABOUT THIS RECORDspecies: Homo sapiens
source: miRBase, original name: hsa-mir-3666 (MI0016067)
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAGTGCAAGTGTAGATGCCGA miRNA* CAGCGTTTCACACTGCCTGGT mismatches: 2 bulges: 4 |
pre-miRNA
AGTAAGGTCCGTCAGTTGTAATGAGACCCAGTGCAAGTGTAGATGCCGACTCCGTGGCAGAGTTCAGCGTTTCACACTGCCTGGTCTCTGTCACTCTATT
GAATTAGATTG
dot-bracket secondary structure
.....((((..(((((.((.((((((((.((.(((.((((((((((.(((((.......)))))..)))))).))))))))))))))).)).))...)))
))....)))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: microarray
references
[1] Xie X, Lu J, Kulbokas EJ, Golub TR, Mootha V, Lindblad-Toh K, Lander ES, Kellis M, Nature. 434:338-345(2005)., "Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals"
[2] Smith B, Treadwell J, Zhang D, Ly D, McKinnell I, Walker PR, Sikorska M, PLoS One. 5:e11109(2010)., "Large-scale expression analysis reveals distinct microRNA profiles at different stages of human neurodevelopment"
AGTAAGGTCCGTCAGTTGTAATGAGACCCAGTGCAAGTGTAGATGCCGACTCCGTGGCAGAGTTCAGCGTTTCACACTGCCTGGTCTCTGTCACTCTATT
GAATTAGATTG
dot-bracket secondary structure
.....((((..(((((.((.((((((((.((.(((.((((((((((.(((((.......)))))..)))))).))))))))))))))).)).))...)))
))....)))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: microarray
references
[1] Xie X, Lu J, Kulbokas EJ, Golub TR, Mootha V, Lindblad-Toh K, Lander ES, Kellis M, Nature. 434:338-345(2005)., "Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals"
[2] Smith B, Treadwell J, Zhang D, Ly D, McKinnell I, Walker PR, Sikorska M, PLoS One. 5:e11109(2010)., "Large-scale expression analysis reveals distinct microRNA profiles at different stages of human neurodevelopment"
