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Species belonging to selected taxon:
Mus musculus
,
Sus scrofa
,
Bos taurus
,
Rattus norvegicus
,
Gallus gallus
,
Canis lupus familiaris
,
Ovis aries
,
Macaca fascicularis
,
Anolis carolinensis
,
Trichosurus vulpecula
,
Papio anubis
,
Homo sapiens
,
Taeniopygia guttata
,
Peromyscus maniculatus bairdii
,
Pongo abelii
,
Ursus americanus
,
Equus caballus
,
Oryctolagus cuniculus
,
Macaca nemestrina
,
Cavia porcellus
,
Bos indicus
,
Meleagris gallopavo
,
Lonchura striata domestica
,
Bos sp.
,
Macropus eugenii
,
Peromyscus polionotus subgriseus
,
Capra hircus
,
Pan troglodytes verus
,
Macaca mulatta
ABOUT THIS RECORD
ID:
MNEST027692
species:
Macaca mulatta
miRNA family:
mir-34
source:
miRBase, original name:
mml-mir-34b
(
MI0007604
)
Taxonomy by NCBI:
Macaca mulatta
Macaca
Cercopithecinae
Cercopithecidae
Cercopithecoidea
Catarrhini
Simiiformes
Haplorrhini
Primates
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CAATCACTAACTCCACTGCCAT
miRNA*
GGCAGTGTCATTAGCTGATTGTA
mismatches:
5
bulges:
1
View larger
pre-miRNA
GTGCTCGGTTTGTA
GGCAGTGTCATTAGCTGATTGTA
CTGTGGTGGTTA
CAATCACTAACTCCACTGCCAT
CAAAACAAGGCAC
dot-bracket secondary structure
(((((..((((...
(((((((...((((.((((((((
((.....)).))
))))))))))...)))))))..
..))))..)))))
SIMILARITIES
miRBase
hsa-mir-34b
:
2e-42
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-34: 1e-31
Identical with:
hsa-mir-34b
from miRBase (
MNEST028402
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Yue J, Sheng Y, Orwig KE,
BMC Genomics. 9:8(2008).
,
"Identification of novel homologous microRNA genes in the rhesus macaque genome"