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Species belonging to selected taxon:
Saccharum hybrid cultivar CoS 767
,
Saccharum hybrid cultivar SP70-1143
,
Saccharum officinarum
,
Sorghum propinquum
,
Zea mays
,
Sorghum bicolor
ABOUT THIS RECORD
ID:
MNEST008498
species:
Sorghum bicolor
miRNA family:
MIRf418
source:
miRNEST
Taxonomy by NCBI:
Sorghum bicolor
Sorghum
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CGAGGTGGAGTACGATACGGA
miRNA*
CGACGTCCTCCGCCTCCAG
mismatches:
4
bulges:
2
View larger
pre-miRNA
GCGGGAGGAGGAGGAGGAGCA
CGAGGTGGAGTACGATACGGA
GCACGGCCT
CGACGTCCTCCGCCTCCAG
ATCTTCTCCCTCACCGCC
dot-bracket secondary structure
((((...((((.((((((...
.(((((((((.(((...(((.
((...)).)
)).))).)))))))))...
.)))))).)))).)))).
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record