miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Alvinella pompejana, Helobdella robusta, Lumbricus rubellus, Tubifex tubifex



ABOUT THIS RECORD

ID: MNEST007463
species: Alvinella pompejana
miRNA family: miR-669k
source: miRNEST

Taxonomy by NCBI:
Alvinella pompejana Alvinella Alvinellidae Terebellida Scolecida Polychaeta Annelida Annelida/Echiura/Pogonophora group Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGTGCATGTGTGTATAACTGT

miRNA*
AGTTGTATGCATTTGTCGGTG

mismatches: 5
bulges: 0

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pre-miRNA
GATTTCACTCTTAGTTGTATGCATTTGTCGGTGTGTGCATGTGTGTATAACTGTGTGTATAAC

dot-bracket secondary structure
.((..(((...(((((((((((((.(((........))).))))))))))))).))).))...


SIMILARITIES
miRBase mmu-mir-467c: 0.00004

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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