miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Acropora millepora, Nematostella vectensis, Acropora palmata, Anemonia viridis, Montastraea faveolata, Metridium senile, Porites astreoides, Aiptasia pallida



ABOUT THIS RECORD

ID: MNEST009746
species: Acropora millepora
miRNA family: mir-74
source: miRNEST

Taxonomy by NCBI:
Acropora millepora Acropora Acroporidae Astrocoeniina Scleractinia Hexacorallia Anthozoa Cnidaria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGCAAGAAATGGCTGACTAC

miRNA*
AGCAGTTGTTTTATGTTGGC

mismatches: 3
bulges: 1

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pre-miRNA
GGAATTGGAGCTGGCAAGAAATGGCTGACTACGACCTCCCGGCAATGATAAACTACGCTCTACAAGTCAGTGGAGAGAAGCAGTTGTTTTATGTTGGC

dot-bracket secondary structure
.........(((((((.((((((((((.((.....((((((....((((................)))).))).))).)))))))))))).)))))))


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q8BM14|LIPK_MOUSE: 0.000007

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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