miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Acropora millepora, Nematostella vectensis, Acropora palmata, Anemonia viridis, Montastraea faveolata, Metridium senile, Porites astreoides, Aiptasia pallida



ABOUT THIS RECORD

ID: MNEST008549
species: Nematostella vectensis
miRNA family: miR-2049
source: miRNEST

Taxonomy by NCBI:
Nematostella vectensis Nematostella Edwardsiidae Actiniaria Hexacorallia Anthozoa Cnidaria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CAAATGCATGCAAATGAAAAT

miRNA*
TTCATTTACATGTAGGGTA

mismatches: 5
bulges: 1

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pre-miRNA
ATTGCTAAGGCTAAGTTTAAACTTAATATTGTCCATAAGCCGTATTCAATGCAAATGCATGCAAATGAAAATAAAATAATTGACTTGGTTCATTTACATG
TAGGGTA
TATATGGCTTATGGATAATAATACAAAGTTTGAACTTAGCTTTAATTC


dot-bracket secondary structure
.....((((((((((((((((((((.(((((((((((((((((((...((((...((((((.(((((((..(((..........))).))))))).))))
))..)))
)))))))))))))))))))).))...))))))))))))))))))....



SIMILARITIES
miRBase nve-mir-2049: 0.0000000005

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





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