ABOUT THIS RECORDspecies: Myzus persicae
miRNA family: miR-4214
source: miRNEST
Taxonomy by NCBI:
Myzus persicae Myzus Macrosiphini Aphidinae Aphididae Aphidoidea Aphidomorpha Aphidiformes Sternorrhyncha Hemiptera Paraneoptera Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTTGTGAAAGTAATGGAGTAT miRNA* ATTTCTACTTTAGGTAGTT mismatches: 4 bulges: 2 |
pre-miRNA
TTTTTTCGTGACGTGAACGATTCAACTTTTTATAGATTTGTGAAAGTAATGGAGTATTTTGAATATTTCTACTTTAGGTAGTTTGTAGTCGTGTATATCA
TGGATTAAAGTATACA
dot-bracket secondary structure
(((.(((((((.(((.(((((.........((((((((....((((((..((((((((...))))))))))))))....))))))))))))).))).)))
))))..))).......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTTTTTCGTGACGTGAACGATTCAACTTTTTATAGATTTGTGAAAGTAATGGAGTATTTTGAATATTTCTACTTTAGGTAGTTTGTAGTCGTGTATATCA
TGGATTAAAGTATACA
dot-bracket secondary structure
(((.(((((((.(((.(((((.........((((((((....((((((..((((((((...))))))))))))))....))))))))))))).))).)))
))))..))).......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
