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Species belonging to selected taxon:

Arabidopsis thaliana



ABOUT THIS RECORD

ID: MNEST003185
species: Arabidopsis thaliana
miRNA family: MIRf245
source: miRNEST

Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CAGGTTTTGGCTCCGGAGGTT

miRNA*
CCTTTTGGGTCAACGCCTTTT

mismatches: 4
bulges: 0

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pre-miRNA
AGGTACACCGTATCCCTGCAGAGGCCATGGATAACACGGAACAGGTTTTGGCTCCGGAGGTTCCTGTCATCTGGCCCTTTCTTATCGCCACCTTTTGGGT
CAACGCCTTTT


dot-bracket secondary structure
.......((((((((..((....))...))))...))))...((((.(((((((.((((((...........(((...........))))))))).))))
))).))))...



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





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