miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arabidopsis thaliana



ABOUT THIS RECORD

ID: MNEST003195
species: Arabidopsis thaliana
miRNA family: MIRf16
source: miRNEST

Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCTCGACCTGGGGGTCGAGT

miRNA*
TCGACCTCTTGGTCGAGTGGT

mismatches: 1
bulges: 0

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pre-miRNA
ATGTCCTCTGCTCGACCTGGGGGTCGAGTGGTCTCTTGAGATCCTGAAGCTCCTACTCGACCTCTTGGTCGAGTGGTTTGTC

dot-bracket secondary structure
.......((((((((((.(((((((((((((...(((.((...)).)))...))))))))))))).))))))))))......


SIMILARITIES
miRBase no hits

PMRD ath-miRf10549-akr: 6e-39

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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