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Species belonging to selected taxon:

Choristoneura fumiferana, Epiphyas postvittana



ABOUT THIS RECORD

ID: MNEST009017
species: Choristoneura fumiferana
miRNA family: miR-2723
source: miRNEST

Taxonomy by NCBI:
Choristoneura fumiferana Choristoneura Archipini Tortricinae Tortricidae Tortricoidea Apoditrysia Ditrysia Heteroneura Neolepidoptera Glossata Lepidoptera Amphiesmenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CCAGCAGTGGACGTCTTTCGG

miRNA*
GGGAGACGAGCTGTCGGTA

mismatches: 2
bulges: 2

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pre-miRNA
CGTCCGCGGACCGGGAGACGAGCTGTCGGTAGGCCTCCAACAAGATGGAGCGACGACTTGGTTAAGACCGCGGGATCGCGGTGGATGCGGAAAGCACAAG
ACCGGTCTGAGTGGAGAGCCTTGGGGGAGGCCTATGTCCAGCAGTGGACGTCTTTCGGCTGACATGA


dot-bracket secondary structure
.(((...((.((((((((((.(((((.(((((((((((..((((.....((...((((.((((...((((((....))))))...(((.....)))...)
)))))))...)).......))))..)))))))))...)).)))))...)))))))))))))))....



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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