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Species belonging to selected taxon:

Elaeis guineensis



ABOUT THIS RECORD

ID: MNEST000558
species: Elaeis guineensis
miRNA family: MIR160
source: miRNEST

Taxonomy by NCBI:
Elaeis guineensis Elaeis Elaeidinae Cocoseae Arecoideae Arecaceae Arecales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCCTGGCTCCCTGTATGCCA

miRNA*
GCGTGCGAGGAGCCAAGCATA

mismatches: 2
bulges: 0

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pre-miRNA
AAGAAGAGGTGAGATGAGTTGTGCCTGGCTCCCTGTATGCCACTGGCTTAGAAACTAATCTATCAATAGATTAGCTACGGCGGGTGGCGTGCGAGGAGCC
AAGCATA
CTCTCGCTCTTTCTCCTC


dot-bracket secondary structure
..((.((((.(((..((((.((((.(((((((.(((((((((((.((((((...((((((((....))))))))))).))).))))))))))).))))))
).)))))
)))...)))..)))).))



SIMILARITIES
miRBase ptc-MIR160d: 0.0000000004

PMRD oba-miR160: 4e-41

microPC miR160: 2e-42
UniProt no hits

RFAM mir-160: 7e-40
most similar mature miRNAs

Identical with: miR160 from microPC (MNEST045369)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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