miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Ciona intestinalis, Molgula tectiformis, Ciona savignyi, Halocynthia roretzi



ABOUT THIS RECORD

ID: MNEST005580
species: Ciona intestinalis
miRNA family: miR-4151
source: miRNEST

Taxonomy by NCBI:
Ciona intestinalis Ciona Cionidae Phlebobranchia Enterogona Ascidiacea Tunicata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGTGATGTCATATTAGTTAA

miRNA*
GTTTGTTTATGACGTCATACAC

mismatches: 3
bulges: 1

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pre-miRNA
ACTATTATTGTTTGTTTATGACGTCATACACATCATTCCATTAACCGCGAGCATTCGAAGTAGGGTCAGTGGTAGTCGCGCGTATTTAGCTCTGCTTATG
TAATAATGGTATTTATGTAGTAGTTGTGATGTCATATTAGTTAATCAGGATGA


dot-bracket secondary structure
......((((.(((..((((((((((((.((..(((.((((((.......((((...(((((((((.((.....((...))....)).))))))))))))
)..)))))).....)))..))...)))))))))))).))).))))........



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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