miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Ciona intestinalis, Molgula tectiformis, Ciona savignyi, Halocynthia roretzi



ABOUT THIS RECORD

ID: MNEST008905
species: Ciona savignyi
miRNA family: miR-3326
source: miRNEST

Taxonomy by NCBI:
Ciona savignyi Ciona Cionidae Phlebobranchia Enterogona Ascidiacea Tunicata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TACGTTTTGTGGTACTTGTGT

miRNA*
ATGGGTTACACAGTCATGTATT

mismatches: 5
bulges: 1

View larger
pre-miRNA
TGTGATGGGTTACACAGTCATGTATTGGTAGAACTTAACAAAGATTTTACGTTTTGTGGTACTTGTGTAGTAAATGG

dot-bracket secondary structure
....((((((..(((((..(((((..(((..............))).))))).)))))..))))))...........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





Liczniki na strone;