miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Ciona intestinalis, Molgula tectiformis, Ciona savignyi, Halocynthia roretzi



ABOUT THIS RECORD

ID: MNEST008740
species: Molgula tectiformis
miRNA family: miR-4206
source: miRNEST

Taxonomy by NCBI:
Molgula tectiformis Molgula Molgulidae Stolidobranchia Ascidiacea Tunicata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATTGAATGGTTTAGTGAGGTC

miRNA*
TCGAACTTGATCATTTAGAGG

mismatches: 5
bulges: 0

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pre-miRNA
CGCTACTACCGATTGAATGGTTTAGTGAGGTCCTCGGATTGGCCCCGCTGCTGCTGGAAACAGTGTCGGCGGCGTGCTGAAAAGAAAATCGAACTTGATC
ATTTAGAGG
AAGTAAAA


dot-bracket secondary structure
...((((.((..((((((((((.(((..(((..((...(((((.((((((.(((((....))))).))))))...)))))...))..)))..))).))))
)))))).))
.))))...



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM SSU_rRNA_eukarya: 3e-20
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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