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Species belonging to selected taxon:

Barnadesia spinosa, Cichorium intybus, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Parthenium argentatum, Taraxacum kok-saghyz, Taraxacum officinale, Zinnia violacea, Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST002928
species: Centaurea maculosa
miRNA family: MIRf1059
source: miRNEST

Taxonomy by NCBI:
Centaurea maculosa Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GTTGCTTTGAAGAAGAGAGGG

miRNA*
 AGTTCTTTTGAAGCACTGC

mismatches: 4
bulges: 2
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pre-miRNA
 AATAGCTACTCAAGTTCCTATATGGTTAGCCGTTGCTTTGAAGAAGAGAGGGAAGTGCACCATTCGCCCTCCGGATTGGATGTCCGTTGAAAAGTTGACT
CAGGTTCTGGAGGCAGAGCGTGACTCTGCTAGTTCTTTTGAAGCACTGCCATTTCACTATGTTGAGATTTCAAGGCT

dot-bracket secondary structure
....((((.(((.((....)).))).))))...((((((..(((((((..((.((..(((..(((..((((((((...((.(((.(((....))).))))
)....))))))))..))).)))...)).))..)))))))))))))..(((((((((......)))))).....))).


SIMILARITIES
miRBase no hits

PMRD ptc-miRf11170-akr: 0.00004

microPC no hits		UniProt sp|Q9C7A8|PSF2_ARATH: 5e-20

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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